Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
RFPL1O75677 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFPL1O75677 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.32■□□□□ 0.84
RFPL1O75677 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFPL1O75677 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFPL1O75677 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.32■□□□□ 0.84
RFPL1O75677 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFPL1O75677 AC245052.3-201ENST00000450182 901 ntBASIC20.32■□□□□ 0.84
RFPL1O75677 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.32■□□□□ 0.84
RFPL1O75677 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.32■□□□□ 0.84
RFPL1O75677 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.32■□□□□ 0.84
RFPL1O75677 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.32■□□□□ 0.84
RFPL1O75677 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFPL1O75677 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFPL1O75677 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFPL1O75677 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.32■□□□□ 0.84
RFPL1O75677 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFPL1O75677 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RFPL1O75677 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFPL1O75677 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
RFPL1O75677 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.31■□□□□ 0.84
RFPL1O75677 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RFPL1O75677 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.31■□□□□ 0.84
RFPL1O75677 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RFPL1O75677 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RFPL1O75677 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.31■□□□□ 0.84
RFPL1O75677 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.31■□□□□ 0.84
RFPL1O75677 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.31■□□□□ 0.84
RFPL1O75677 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.31■□□□□ 0.84
RFPL1O75677 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RFPL1O75677 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RFPL1O75677 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.31■□□□□ 0.84
RFPL1O75677 AC116050.2-201ENST00000612102 1779 ntBASIC20.31■□□□□ 0.84
RFPL1O75677 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RFPL1O75677 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL1O75677 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.3■□□□□ 0.84
RFPL1O75677 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFPL1O75677 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.3■□□□□ 0.84
RFPL1O75677 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.3■□□□□ 0.84
RFPL1O75677 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.3■□□□□ 0.84
RFPL1O75677 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.3■□□□□ 0.84
RFPL1O75677 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFPL1O75677 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RFPL1O75677 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.3■□□□□ 0.84
RFPL1O75677 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL1O75677 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.29■□□□□ 0.84
RFPL1O75677 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
RFPL1O75677 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.29■□□□□ 0.84
RFPL1O75677 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.29■□□□□ 0.84
RFPL1O75677 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 KRT18P11-201ENST00000435214 1283 ntBASIC20.29■□□□□ 0.84
RFPL1O75677 AC104771.1-201ENST00000603335 964 ntBASIC20.29■□□□□ 0.84
RFPL1O75677 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.29■□□□□ 0.84
RFPL1O75677 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.29■□□□□ 0.84
RFPL1O75677 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.29■□□□□ 0.84
RFPL1O75677 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL1O75677 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFPL1O75677 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.28■□□□□ 0.84
RFPL1O75677 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
RFPL1O75677 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.28■□□□□ 0.84
RFPL1O75677 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.28■□□□□ 0.84
RFPL1O75677 AC010141.2-201ENST00000452426 721 ntBASIC20.28■□□□□ 0.84
RFPL1O75677 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.28■□□□□ 0.84
RFPL1O75677 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.28■□□□□ 0.84
RFPL1O75677 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.28■□□□□ 0.84
RFPL1O75677 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFPL1O75677 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms