Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 VENTXP5-201ENST00000523979 775 ntBASIC9.14□□□□□ -0.95
USH2AO75445 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 AC026271.3-201ENST00000571884 352 ntBASIC9.14□□□□□ -0.95
USH2AO75445 HOTTIP_1.1-201ENST00000620415 57 ntBASIC9.14□□□□□ -0.95
USH2AO75445 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC9.14□□□□□ -0.95
USH2AO75445 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
USH2AO75445 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
USH2AO75445 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC9.13□□□□□ -0.95
USH2AO75445 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
USH2AO75445 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 CR392000.1-201ENST00000624770 1228 ntBASIC9.13□□□□□ -0.95
USH2AO75445 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC9.13□□□□□ -0.95
USH2AO75445 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC9.13□□□□□ -0.95
USH2AO75445 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
USH2AO75445 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
USH2AO75445 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
USH2AO75445 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC9.12□□□□□ -0.95
USH2AO75445 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
USH2AO75445 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC9.12□□□□□ -0.95
USH2AO75445 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC9.12□□□□□ -0.95
USH2AO75445 ABBA01031674.1-201ENST00000635145 728 ntBASIC9.12□□□□□ -0.95
USH2AO75445 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
USH2AO75445 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
USH2AO75445 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC9.12□□□□□ -0.95
USH2AO75445 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC9.12□□□□□ -0.95
USH2AO75445 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC9.12□□□□□ -0.95
USH2AO75445 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC9.12□□□□□ -0.95
USH2AO75445 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC9.12□□□□□ -0.95
USH2AO75445 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC9.12□□□□□ -0.95
USH2AO75445 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 NIFKP9-201ENST00000419265 221 ntBASIC9.12□□□□□ -0.95
USH2AO75445 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC9.12□□□□□ -0.95
USH2AO75445 HYMAI.1-201ENST00000620949 238 ntBASIC9.12□□□□□ -0.95
USH2AO75445 AC116407.4-201ENST00000623319 1061 ntBASIC9.12□□□□□ -0.95
USH2AO75445 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC9.12□□□□□ -0.95
USH2AO75445 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
USH2AO75445 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 AC022898.2-201ENST00000616822 1312 ntBASIC9.12□□□□□ -0.95
USH2AO75445 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
USH2AO75445 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
USH2AO75445 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC9.11□□□□□ -0.95
USH2AO75445 AL390719.1-204ENST00000412397 1219 ntBASIC9.11□□□□□ -0.95
USH2AO75445 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC9.11□□□□□ -0.95
USH2AO75445 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC9.11□□□□□ -0.95
USH2AO75445 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
USH2AO75445 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms