Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SCN2BO60939 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SCN2BO60939 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN2BO60939 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN2BO60939 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SCN2BO60939 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN2BO60939 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SCN2BO60939 KRT19P1-201ENST00000405746 1186 ntBASIC19.2■□□□□ 0.66
SCN2BO60939 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.2■□□□□ 0.66
SCN2BO60939 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SCN2BO60939 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SCN2BO60939 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN2BO60939 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN2BO60939 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN2BO60939 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN2BO60939 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN2BO60939 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SCN2BO60939 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN2BO60939 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN2BO60939 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.19■□□□□ 0.66
SCN2BO60939 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN2BO60939 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN2BO60939 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SCN2BO60939 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN2BO60939 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 UBE2DNL-204ENST00000602536 740 ntBASIC19.18■□□□□ 0.66
SCN2BO60939 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN2BO60939 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCN2BO60939 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN2BO60939 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN2BO60939 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN2BO60939 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN2BO60939 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SCN2BO60939 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN2BO60939 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN2BO60939 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN2BO60939 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN2BO60939 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN2BO60939 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN2BO60939 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN2BO60939 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN2BO60939 AC125437.2-201ENST00000625180 2167 ntBASIC19.16■□□□□ 0.66
SCN2BO60939 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCN2BO60939 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN2BO60939 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN2BO60939 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN2BO60939 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.16■□□□□ 0.66
SCN2BO60939 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN2BO60939 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SCN2BO60939 MYCNOS-205ENST00000641950 531 ntBASIC19.16■□□□□ 0.66
SCN2BO60939 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN2BO60939 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN2BO60939 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms