Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
DLX3O60479 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.87■□□□□ 0.77
DLX3O60479 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DLX3O60479 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
DLX3O60479 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.87■□□□□ 0.77
DLX3O60479 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DLX3O60479 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DLX3O60479 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.86■□□□□ 0.77
DLX3O60479 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.86■□□□□ 0.77
DLX3O60479 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.86■□□□□ 0.77
DLX3O60479 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DLX3O60479 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DLX3O60479 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.86■□□□□ 0.77
DLX3O60479 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
DLX3O60479 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.86■□□□□ 0.77
DLX3O60479 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.86■□□□□ 0.77
DLX3O60479 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.86■□□□□ 0.77
DLX3O60479 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.86■□□□□ 0.77
DLX3O60479 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.86■□□□□ 0.77
DLX3O60479 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.86■□□□□ 0.77
DLX3O60479 AL158211.5-201ENST00000623583 2518 ntBASIC19.86■□□□□ 0.77
DLX3O60479 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
DLX3O60479 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 AL691432.2-201ENST00000607222 2038 ntBASIC19.86■□□□□ 0.77
DLX3O60479 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DLX3O60479 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.85■□□□□ 0.77
DLX3O60479 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.85■□□□□ 0.77
DLX3O60479 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 KRT18P61-201ENST00000585825 1298 ntBASIC19.85■□□□□ 0.77
DLX3O60479 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.85■□□□□ 0.77
DLX3O60479 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
DLX3O60479 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
DLX3O60479 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.85■□□□□ 0.77
DLX3O60479 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.85■□□□□ 0.77
DLX3O60479 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
DLX3O60479 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DLX3O60479 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.84■□□□□ 0.77
DLX3O60479 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.84■□□□□ 0.77
DLX3O60479 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.84■□□□□ 0.77
DLX3O60479 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.84■□□□□ 0.77
DLX3O60479 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DLX3O60479 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.84■□□□□ 0.77
DLX3O60479 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DLX3O60479 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DLX3O60479 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DLX3O60479 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DLX3O60479 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
DLX3O60479 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
DLX3O60479 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DLX3O60479 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DLX3O60479 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
DLX3O60479 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DLX3O60479 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.83■□□□□ 0.77
DLX3O60479 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
DLX3O60479 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.83■□□□□ 0.77
DLX3O60479 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.83■□□□□ 0.77
DLX3O60479 FAM21FP-204ENST00000608637 956 ntBASIC19.83■□□□□ 0.77
DLX3O60479 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.83■□□□□ 0.77
DLX3O60479 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DLX3O60479 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DLX3O60479 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DLX3O60479 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DLX3O60479 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DLX3O60479 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DLX3O60479 BX119927.1-201ENST00000636596 1552 ntBASIC19.83■□□□□ 0.76
DLX3O60479 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DLX3O60479 AC116562.4-201ENST00000641316 2276 ntBASIC19.82■□□□□ 0.76
DLX3O60479 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DLX3O60479 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DLX3O60479 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
DLX3O60479 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DLX3O60479 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms