Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 AC105233.4-201ENST00000642045 216 ntBASIC17.31■□□□□ 0.36
SSX5O60225 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.31■□□□□ 0.36
SSX5O60225 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX5O60225 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX5O60225 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX5O60225 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX5O60225 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX5O60225 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX5O60225 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX5O60225 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSX5O60225 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX5O60225 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SSX5O60225 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SSX5O60225 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX5O60225 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX5O60225 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX5O60225 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 AC116562.4-201ENST00000641316 2276 ntBASIC17.3■□□□□ 0.36
SSX5O60225 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SSX5O60225 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX5O60225 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.3■□□□□ 0.36
SSX5O60225 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.3■□□□□ 0.36
SSX5O60225 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.3■□□□□ 0.36
SSX5O60225 AC053503.5-201ENST00000601508 636 ntBASIC17.3■□□□□ 0.36
SSX5O60225 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX5O60225 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX5O60225 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SSX5O60225 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX5O60225 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
SSX5O60225 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX5O60225 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX5O60225 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX5O60225 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.29■□□□□ 0.36
SSX5O60225 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX5O60225 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SSX5O60225 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX5O60225 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SSX5O60225 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX5O60225 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX5O60225 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX5O60225 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SSX5O60225 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.28■□□□□ 0.36
SSX5O60225 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX5O60225 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SSX5O60225 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX5O60225 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX5O60225 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX5O60225 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SSX5O60225 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX5O60225 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX5O60225 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX5O60225 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSX5O60225 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSX5O60225 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX5O60225 UNC93B3-201ENST00000308076 687 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms