Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.59■□□□□ 0.89
KDELR3O43731 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDELR3O43731 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDELR3O43731 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDELR3O43731 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDELR3O43731 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.58■□□□□ 0.89
KDELR3O43731 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.58■□□□□ 0.89
KDELR3O43731 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.58■□□□□ 0.89
KDELR3O43731 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
KDELR3O43731 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.58■□□□□ 0.89
KDELR3O43731 RNA5SP413-201ENST00000516373 109 ntBASIC20.58■□□□□ 0.89
KDELR3O43731 CD99P1-205ENST00000527459 561 ntBASIC20.58■□□□□ 0.89
KDELR3O43731 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.58■□□□□ 0.89
KDELR3O43731 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDELR3O43731 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDELR3O43731 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KDELR3O43731 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDELR3O43731 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.58■□□□□ 0.88
KDELR3O43731 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDELR3O43731 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDELR3O43731 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
KDELR3O43731 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.58■□□□□ 0.88
KDELR3O43731 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
KDELR3O43731 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.57■□□□□ 0.88
KDELR3O43731 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KDELR3O43731 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.57■□□□□ 0.88
KDELR3O43731 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.57■□□□□ 0.88
KDELR3O43731 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.57■□□□□ 0.88
KDELR3O43731 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.57■□□□□ 0.88
KDELR3O43731 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDELR3O43731 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KDELR3O43731 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KDELR3O43731 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KDELR3O43731 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.56■□□□□ 0.88
KDELR3O43731 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.56■□□□□ 0.88
KDELR3O43731 AC092368.3-202ENST00000574180 1591 ntBASIC20.56■□□□□ 0.88
KDELR3O43731 FEM1AP1-201ENST00000431297 1995 ntBASIC20.56■□□□□ 0.88
KDELR3O43731 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KDELR3O43731 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
KDELR3O43731 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KDELR3O43731 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.56■□□□□ 0.88
KDELR3O43731 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.56■□□□□ 0.88
KDELR3O43731 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.56■□□□□ 0.88
KDELR3O43731 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KDELR3O43731 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KDELR3O43731 AC020907.5-201ENST00000624372 1936 ntBASIC20.56■□□□□ 0.88
KDELR3O43731 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.56■□□□□ 0.88
KDELR3O43731 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
KDELR3O43731 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KDELR3O43731 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KDELR3O43731 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KDELR3O43731 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
KDELR3O43731 AC073314.1-201ENST00000568729 2216 ntBASIC20.55■□□□□ 0.88
KDELR3O43731 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.55■□□□□ 0.88
KDELR3O43731 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
KDELR3O43731 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 DPP3P2-201ENST00000416030 1696 ntBASIC20.55■□□□□ 0.88
KDELR3O43731 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.55■□□□□ 0.88
KDELR3O43731 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.55■□□□□ 0.88
KDELR3O43731 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.55■□□□□ 0.88
KDELR3O43731 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.55■□□□□ 0.88
KDELR3O43731 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 AC023632.3-201ENST00000521633 145 ntBASIC20.55■□□□□ 0.88
KDELR3O43731 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.55■□□□□ 0.88
KDELR3O43731 PNMA6B-201ENST00000538162 1200 ntBASIC20.55■□□□□ 0.88
KDELR3O43731 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 PTBP1P-201ENST00000554374 1601 ntBASIC20.55■□□□□ 0.88
KDELR3O43731 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KDELR3O43731 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KDELR3O43731 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms