Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.58■□□□□ 0.89
RIPK2O43353 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.58■□□□□ 0.89
RIPK2O43353 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK2O43353 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK2O43353 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK2O43353 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.58■□□□□ 0.88
RIPK2O43353 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 AC004408.2-201ENST00000623613 2777 ntBASIC20.57■□□□□ 0.88
RIPK2O43353 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPK2O43353 TREX1-205ENST00000625293 1783 ntBASIC20.57■□□□□ 0.88
RIPK2O43353 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPK2O43353 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPK2O43353 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RIPK2O43353 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RIPK2O43353 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPK2O43353 TPRG1LP1-201ENST00000598702 760 ntBASIC20.57■□□□□ 0.88
RIPK2O43353 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.57■□□□□ 0.88
RIPK2O43353 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RIPK2O43353 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.57■□□□□ 0.88
RIPK2O43353 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK2O43353 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPK2O43353 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK2O43353 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.56■□□□□ 0.88
RIPK2O43353 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK2O43353 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.56■□□□□ 0.88
RIPK2O43353 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK2O43353 BX119927.1-201ENST00000636596 1552 ntBASIC20.56■□□□□ 0.88
RIPK2O43353 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.56■□□□□ 0.88
RIPK2O43353 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
RIPK2O43353 AC012414.1-201ENST00000556676 535 ntBASIC20.56■□□□□ 0.88
RIPK2O43353 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RIPK2O43353 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK2O43353 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK2O43353 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.56■□□□□ 0.88
RIPK2O43353 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RIPK2O43353 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK2O43353 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RIPK2O43353 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.55■□□□□ 0.88
RIPK2O43353 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RIPK2O43353 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RIPK2O43353 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK2O43353 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK2O43353 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.54■□□□□ 0.88
RIPK2O43353 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RIPK2O43353 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK2O43353 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.54■□□□□ 0.88
RIPK2O43353 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK2O43353 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.54■□□□□ 0.88
RIPK2O43353 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.54■□□□□ 0.88
RIPK2O43353 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK2O43353 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK2O43353 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.53■□□□□ 0.88
RIPK2O43353 KRT8P36-201ENST00000489121 1440 ntBASIC20.53■□□□□ 0.88
RIPK2O43353 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK2O43353 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPK2O43353 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPK2O43353 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK2O43353 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RIPK2O43353 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
RIPK2O43353 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK2O43353 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RIPK2O43353 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK2O43353 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.53■□□□□ 0.88
RIPK2O43353 AC138907.5-202ENST00000569484 235 ntBASIC20.53■□□□□ 0.88
RIPK2O43353 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.53■□□□□ 0.88
RIPK2O43353 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK2O43353 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK2O43353 KRT87P-202ENST00000534226 1464 ntBASIC20.53■□□□□ 0.88
RIPK2O43353 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RIPK2O43353 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms