Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN9O14815 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN9O14815 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CAPN9O14815 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 MIPEPP3-201ENST00000412105 444 ntBASIC21.36■■□□□ 1.01
CAPN9O14815 GUSBP6-202ENST00000438529 1198 ntBASIC21.36■■□□□ 1.01
CAPN9O14815 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN9O14815 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.36■■□□□ 1.01
CAPN9O14815 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN9O14815 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CAPN9O14815 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN9O14815 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.36■■□□□ 1.01
CAPN9O14815 MIR2861-201ENST00000636310 90 ntBASIC21.36■■□□□ 1.01
CAPN9O14815 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN9O14815 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN9O14815 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN9O14815 RNF165-205ENST00000588679 2904 ntBASIC21.35■■□□□ 1.01
CAPN9O14815 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN9O14815 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.35■■□□□ 1.01
CAPN9O14815 AL589743.5-201ENST00000616611 1050 ntBASIC21.35■■□□□ 1.01
CAPN9O14815 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPN9O14815 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CAPN9O14815 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPN9O14815 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CAPN9O14815 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN9O14815 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN9O14815 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN9O14815 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN9O14815 AC007225.1-201ENST00000566331 1836 ntBASIC21.34■■□□□ 1.01
CAPN9O14815 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN9O14815 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.34■■□□□ 1.01
CAPN9O14815 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.34■■□□□ 1.01
CAPN9O14815 AL356652.1-201ENST00000615962 565 ntBASIC21.34■■□□□ 1.01
CAPN9O14815 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN9O14815 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN9O14815 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN9O14815 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN9O14815 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN9O14815 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN9O14815 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN9O14815 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN9O14815 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN9O14815 AL355802.2-201ENST00000402069 882 ntBASIC21.33■■□□□ 1.01
CAPN9O14815 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.33■■□□□ 1.01
CAPN9O14815 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN9O14815 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
CAPN9O14815 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.33■■□□□ 1
CAPN9O14815 KRT17P1-201ENST00000399211 1546 ntBASIC21.33■■□□□ 1
CAPN9O14815 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CAPN9O14815 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN9O14815 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN9O14815 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.32■■□□□ 1
CAPN9O14815 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN9O14815 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN9O14815 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CAPN9O14815 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN9O14815 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.32■■□□□ 1
CAPN9O14815 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CAPN9O14815 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN9O14815 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.32■■□□□ 1
CAPN9O14815 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CAPN9O14815 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.32■■□□□ 1
CAPN9O14815 MIR4758-201ENST00000577688 71 ntBASIC21.32■■□□□ 1
CAPN9O14815 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN9O14815 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms