Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
UPK2O00526 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
UPK2O00526 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UPK2O00526 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK2O00526 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UPK2O00526 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK2O00526 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK2O00526 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK2O00526 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.25■□□□□ 0.19
UPK2O00526 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UPK2O00526 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK2O00526 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK2O00526 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK2O00526 KRT18P61-201ENST00000585825 1298 ntBASIC16.25■□□□□ 0.19
UPK2O00526 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
UPK2O00526 MYCNOS-205ENST00000641950 531 ntBASIC16.25■□□□□ 0.19
UPK2O00526 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
UPK2O00526 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UPK2O00526 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK2O00526 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK2O00526 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UPK2O00526 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UPK2O00526 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK2O00526 DPP3P2-201ENST00000416030 1696 ntBASIC16.24■□□□□ 0.19
UPK2O00526 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
UPK2O00526 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
UPK2O00526 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
UPK2O00526 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UPK2O00526 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.24■□□□□ 0.19
UPK2O00526 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 AC097381.1-201ENST00000429019 1296 ntBASIC16.24■□□□□ 0.19
UPK2O00526 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK2O00526 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK2O00526 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.24■□□□□ 0.19
UPK2O00526 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UPK2O00526 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.24■□□□□ 0.19
UPK2O00526 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK2O00526 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
UPK2O00526 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UPK2O00526 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK2O00526 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK2O00526 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.23■□□□□ 0.19
UPK2O00526 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.23■□□□□ 0.19
UPK2O00526 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.23■□□□□ 0.19
UPK2O00526 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UPK2O00526 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.23■□□□□ 0.19
UPK2O00526 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.23■□□□□ 0.19
UPK2O00526 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.23■□□□□ 0.19
UPK2O00526 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.23■□□□□ 0.19
UPK2O00526 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UPK2O00526 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK2O00526 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK2O00526 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK2O00526 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UPK2O00526 PGM5P4-201ENST00000421970 445 ntBASIC16.22■□□□□ 0.19
UPK2O00526 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.22■□□□□ 0.19
UPK2O00526 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.22■□□□□ 0.19
UPK2O00526 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UPK2O00526 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
UPK2O00526 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK2O00526 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.22■□□□□ 0.19
UPK2O00526 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK2O00526 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UPK2O00526 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK2O00526 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms