Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 MIR718-201ENST00000390190 70 ntBASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMX2-CTNND1H3BSU7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 PNMA6B-201ENST00000538162 1200 ntBASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 LINC01006-201ENST00000333319 2292 ntBASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.84■□□□□ 0.77
TMX2-CTNND1H3BSU7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.83■□□□□ 0.77
TMX2-CTNND1H3BSU7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMX2-CTNND1H3BSU7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMX2-CTNND1H3BSU7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMX2-CTNND1H3BSU7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TMX2-CTNND1H3BSU7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC092368.3-202ENST00000574180 1591 ntBASIC19.83■□□□□ 0.76
TMX2-CTNND1H3BSU7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMX2-CTNND1H3BSU7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TMX2-CTNND1H3BSU7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC008550.1-201ENST00000511500 884 ntBASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC008403.3-201ENST00000598924 454 ntBASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.82■□□□□ 0.76
TMX2-CTNND1H3BSU7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms