Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 KRT17P3-201ENST00000420566 1262 ntBASIC20.17■□□□□ 0.82
H3BM21 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
H3BM21 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.17■□□□□ 0.82
H3BM21 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.17■□□□□ 0.82
H3BM21 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
H3BM21 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
H3BM21 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
H3BM21 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
H3BM21 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
H3BM21 PLK5-205ENST00000642079 1969 ntBASIC20.17■□□□□ 0.82
H3BM21 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
H3BM21 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
H3BM21 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.17■□□□□ 0.82
H3BM21 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
H3BM21 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
H3BM21 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
H3BM21 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
H3BM21 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.16■□□□□ 0.82
H3BM21 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.16■□□□□ 0.82
H3BM21 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.16■□□□□ 0.82
H3BM21 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.16■□□□□ 0.82
H3BM21 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
H3BM21 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.16■□□□□ 0.82
H3BM21 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
H3BM21 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
H3BM21 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.16■□□□□ 0.82
H3BM21 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.16■□□□□ 0.82
H3BM21 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
H3BM21 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.16■□□□□ 0.82
H3BM21 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
H3BM21 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.16■□□□□ 0.82
H3BM21 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
H3BM21 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3BM21 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H3BM21 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
H3BM21 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.15■□□□□ 0.82
H3BM21 UNC93B4-201ENST00000505679 747 ntBASIC20.15■□□□□ 0.82
H3BM21 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
H3BM21 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.15■□□□□ 0.82
H3BM21 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.15■□□□□ 0.82
H3BM21 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
H3BM21 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H3BM21 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.15■□□□□ 0.82
H3BM21 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
H3BM21 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H3BM21 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
H3BM21 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.15■□□□□ 0.82
H3BM21 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H3BM21 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H3BM21 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
H3BM21 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
H3BM21 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.14■□□□□ 0.81
H3BM21 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H3BM21 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H3BM21 AC087633.2-202ENST00000565166 1439 ntBASIC20.14■□□□□ 0.81
H3BM21 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H3BM21 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H3BM21 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H3BM21 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H3BM21 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.14■□□□□ 0.81
H3BM21 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.14■□□□□ 0.81
H3BM21 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H3BM21 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.14■□□□□ 0.81
H3BM21 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.14■□□□□ 0.81
H3BM21 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
H3BM21 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.14■□□□□ 0.81
H3BM21 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.14■□□□□ 0.81
H3BM21 AC008403.3-201ENST00000598924 454 ntBASIC20.14■□□□□ 0.81
H3BM21 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
H3BM21 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.14■□□□□ 0.81
H3BM21 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
H3BM21 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
H3BM21 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
H3BM21 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.13■□□□□ 0.81
H3BM21 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.13■□□□□ 0.81
H3BM21 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.13■□□□□ 0.81
H3BM21 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
H3BM21 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.13■□□□□ 0.81
H3BM21 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
H3BM21 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.13■□□□□ 0.81
H3BM21 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.13■□□□□ 0.81
H3BM21 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
H3BM21 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
H3BM21 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms