Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.95■□□□□ 0.94
SRRM3A6NNA2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRRM3A6NNA2 AC112907.3-201ENST00000577781 2400 ntBASIC20.94■□□□□ 0.94
SRRM3A6NNA2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRRM3A6NNA2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SRRM3A6NNA2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRRM3A6NNA2 AC073210.2-201ENST00000430369 194 ntBASIC20.94■□□□□ 0.94
SRRM3A6NNA2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRRM3A6NNA2 MFSD11-216ENST00000590393 1141 ntBASIC20.94■□□□□ 0.94
SRRM3A6NNA2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRRM3A6NNA2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRRM3A6NNA2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SRRM3A6NNA2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRRM3A6NNA2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 AC005181.1-201ENST00000604782 1256 ntBASIC20.92■□□□□ 0.94
SRRM3A6NNA2 AC231657.2-201ENST00000624556 255 ntBASIC20.92■□□□□ 0.94
SRRM3A6NNA2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRRM3A6NNA2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 MIR1224-201ENST00000408193 85 ntBASIC20.91■□□□□ 0.94
SRRM3A6NNA2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 OR2I1P-207ENST00000453522 948 ntBASIC20.91■□□□□ 0.94
SRRM3A6NNA2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRRM3A6NNA2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 AC098590.1-201ENST00000468126 897 ntBASIC20.9■□□□□ 0.94
SRRM3A6NNA2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms