Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16■□□□□ 0.15
LINC01548A6NM66 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16■□□□□ 0.15
LINC01548A6NM66 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16■□□□□ 0.15
LINC01548A6NM66 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16■□□□□ 0.15
LINC01548A6NM66 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16■□□□□ 0.15
LINC01548A6NM66 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16■□□□□ 0.15
LINC01548A6NM66 RNA5SP413-201ENST00000516373 109 ntBASIC16■□□□□ 0.15
LINC01548A6NM66 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16■□□□□ 0.15
LINC01548A6NM66 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16■□□□□ 0.15
LINC01548A6NM66 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01548A6NM66 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 CD99P1-205ENST00000527459 561 ntBASIC15.99■□□□□ 0.15
LINC01548A6NM66 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01548A6NM66 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01548A6NM66 AL157384.1-201ENST00000445995 2473 ntBASIC15.99■□□□□ 0.15
LINC01548A6NM66 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01548A6NM66 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01548A6NM66 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01548A6NM66 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01548A6NM66 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01548A6NM66 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LINC01548A6NM66 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01548A6NM66 AC073314.1-201ENST00000568729 2216 ntBASIC15.98■□□□□ 0.15
LINC01548A6NM66 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01548A6NM66 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 MIR4651-201ENST00000582622 73 ntBASIC15.97■□□□□ 0.15
LINC01548A6NM66 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 AC092667.1-201ENST00000434301 2586 ntBASIC15.97■□□□□ 0.15
LINC01548A6NM66 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms