Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.53■□□□□ 0.88
CAPN8A6NHC0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN8A6NHC0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CAPN8A6NHC0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.52■□□□□ 0.87
CAPN8A6NHC0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
CAPN8A6NHC0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.52■□□□□ 0.87
CAPN8A6NHC0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 PGM5P4-201ENST00000421970 445 ntBASIC20.51■□□□□ 0.87
CAPN8A6NHC0 AL355472.2-201ENST00000422958 438 ntBASIC20.51■□□□□ 0.87
CAPN8A6NHC0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 AP006294.2-201ENST00000641667 209 ntBASIC20.51■□□□□ 0.87
CAPN8A6NHC0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN8A6NHC0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 MIR2861-201ENST00000636310 90 ntBASIC20.5■□□□□ 0.87
CAPN8A6NHC0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN8A6NHC0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 MIPEPP3-201ENST00000412105 444 ntBASIC20.49■□□□□ 0.87
CAPN8A6NHC0 BX276092.2-201ENST00000417668 665 ntBASIC20.49■□□□□ 0.87
CAPN8A6NHC0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms