Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.27■□□□□ 0.36
TMEM235A6NFC5 AC008764.7-201ENST00000593779 1081 ntBASIC17.27■□□□□ 0.36
TMEM235A6NFC5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM235A6NFC5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 AP000974.1-201ENST00000623909 2387 ntBASIC17.26■□□□□ 0.35
TMEM235A6NFC5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM235A6NFC5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 AC099791.1-201ENST00000416440 715 ntBASIC17.25■□□□□ 0.35
TMEM235A6NFC5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 AL136162.1-201ENST00000607711 1078 ntBASIC17.25■□□□□ 0.35
TMEM235A6NFC5 AC008175.2-201ENST00000612840 297 ntBASIC17.25■□□□□ 0.35
TMEM235A6NFC5 RARRES2P11-201ENST00000635158 484 ntBASIC17.25■□□□□ 0.35
TMEM235A6NFC5 MIR2861-201ENST00000636310 90 ntBASIC17.25■□□□□ 0.35
TMEM235A6NFC5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM235A6NFC5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TMEM235A6NFC5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 AC135279.3-201ENST00000610945 1311 ntBASIC17.23■□□□□ 0.35
TMEM235A6NFC5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 POU5F1P4-201ENST00000413175 1085 ntBASIC17.23■□□□□ 0.35
TMEM235A6NFC5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms