Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 AC124016.1-201ENST00000609552 612 ntBASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TBC1D3BA6NDS4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TBC1D3BA6NDS4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TBC1D3BA6NDS4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.64■□□□□ 0.9
TBC1D3BA6NDS4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 SNORA78-201ENST00000459373 127 ntBASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.64■□□□□ 0.89
TBC1D3BA6NDS4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 AC133681.1-201ENST00000465482 601 ntBASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 AL024507.2-201ENST00000606070 2574 ntBASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3BA6NDS4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 AC121338.2-201ENST00000622535 1744 ntBASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 KRASP1-201ENST00000407852 552 ntBASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 AC110285.5-201ENST00000611501 352 ntBASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 MIR2861-201ENST00000636310 90 ntBASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3BA6NDS4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 KRT8P36-201ENST00000489121 1440 ntBASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 AL049796.1-201ENST00000565336 1766 ntBASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3BA6NDS4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms