Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 AC099778.1-201ENST00000568593 1911 ntBASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 AC024257.2-201ENST00000549699 147 ntBASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV13-1A0A0B4J241 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 TSPY26P-201ENST00000476365 1326 ntBASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 AC135279.3-201ENST00000610945 1311 ntBASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-1A0A0B4J241 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV13-1A0A0B4J241 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV13-1A0A0B4J241 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV13-1A0A0B4J241 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
TRAV13-1A0A0B4J241 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV13-1A0A0B4J241 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 AL162377.1-201ENST00000618844 1793 ntBASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-1A0A0B4J241 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms