Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 AL390961.4-201ENST00000623958 2535 ntBASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV9-1A0A075B6T8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 Z92544.1-202ENST00000571933 1220 ntBASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 LTB4R2-202ENST00000528054 3092 ntBASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV9-1A0A075B6T8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-1A0A075B6T8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV9-1A0A075B6T8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV9-1A0A075B6T8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-1A0A075B6T8 AC005332.8-201ENST00000622750 2735 ntBASIC15.21■□□□□ 0.02
TRAV9-1A0A075B6T8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TRAV9-1A0A075B6T8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-1A0A075B6T8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-1A0A075B6T8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 GPX1-201ENST00000419349 1106 ntBASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms