Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
UBE4BO95155 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 C4orf22-201ENST00000358105 895 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 SNORA30-201ENST00000384028 129 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 TDGF1P4-201ENST00000401555 520 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 AL035467.1-201ENST00000403583 686 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC8.99□□□□□ -0.97
UBE4BO95155 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC8.99□□□□□ -0.97
UBE4BO95155 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC8.99□□□□□ -0.97
UBE4BO95155 UGT2B29P-201ENST00000509021 973 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC8.99□□□□□ -0.97
UBE4BO95155 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.99□□□□□ -0.97
UBE4BO95155 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC8.99□□□□□ -0.97
UBE4BO95155 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.99□□□□□ -0.97
UBE4BO95155 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.99□□□□□ -0.97
UBE4BO95155 OR7E15P-201ENST00000533484 967 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 AC009779.4-201ENST00000554248 611 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC8.99□□□□□ -0.97
UBE4BO95155 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC8.99□□□□□ -0.97
UBE4BO95155 AC006967.3-201ENST00000594086 1093 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.99□□□□□ -0.97
UBE4BO95155 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC8.99□□□□□ -0.97
UBE4BO95155 RHOXF1P2-201ENST00000635431 502 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC8.99□□□□□ -0.97
UBE4BO95155 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.99□□□□□ -0.97
UBE4BO95155 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
UBE4BO95155 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.99□□□□□ -0.97
UBE4BO95155 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
UBE4BO95155 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.99□□□□□ -0.97
UBE4BO95155 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
UBE4BO95155 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
UBE4BO95155 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE4BO95155 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.98□□□□□ -0.97
UBE4BO95155 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
UBE4BO95155 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
UBE4BO95155 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 SLC3A1-208ENST00000410056 1426 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
UBE4BO95155 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC8.98□□□□□ -0.97
UBE4BO95155 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
UBE4BO95155 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 GPN2-201ENST00000374133 715 ntTSL 3 BASIC8.98□□□□□ -0.97
UBE4BO95155 CREM-213ENST00000374734 711 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE4BO95155 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
UBE4BO95155 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
UBE4BO95155 AC003080.1-201ENST00000413552 767 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 AC019181.1-201ENST00000417151 310 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 HSPA8P3-201ENST00000449300 780 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC8.98□□□□□ -0.97
UBE4BO95155 AC074051.1-201ENST00000470389 781 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 CREM-231ENST00000479070 939 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE4BO95155 AC113208.1-201ENST00000497944 318 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC8.98□□□□□ -0.97
UBE4BO95155 AC115837.1-201ENST00000517662 1001 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 AC091982.1-201ENST00000518134 520 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 AL109628.2-201ENST00000554037 201 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE4BO95155 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE4BO95155 AC005262.1-201ENST00000588562 362 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
UBE4BO95155 AL161729.2-201ENST00000605700 456 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 AC112187.3-201ENST00000607844 408 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 RBM22P4-201ENST00000613117 1240 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 AL157359.3-201ENST00000623771 217 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 EEF1A1P13-201ENST00000503537 1389 ntBASIC8.98□□□□□ -0.97
UBE4BO95155 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.98□□□□□ -0.97
UBE4BO95155 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE4BO95155 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE4BO95155 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.97□□□□□ -0.97
UBE4BO95155 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE4BO95155 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE4BO95155 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.97□□□□□ -0.97
UBE4BO95155 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE4BO95155 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE4BO95155 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.97□□□□□ -0.97
UBE4BO95155 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE4BO95155 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE4BO95155 AC138904.1-201ENST00000501520 2481 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE4BO95155 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE4BO95155 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms