Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC8.75□□□□□ -1.01
SYCE2Q6PIF2 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SYCE2Q6PIF2 AC048380.2-201ENST00000624725 3548 ntBASIC8.75□□□□□ -1.01
SYCE2Q6PIF2 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
SYCE2Q6PIF2 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 RN7SKP10-201ENST00000364291 325 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 NHP2P2-201ENST00000396362 460 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 RBMY2FP-202ENST00000420346 1263 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AL109809.3-201ENST00000456875 246 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AC010368.1-201ENST00000510160 456 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AC073913.2-201ENST00000541512 145 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AL162311.2-201ENST00000550416 709 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 LINC01922-201ENST00000562582 719 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 RN7SL657P-201ENST00000582431 293 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 SATB1-AS1-212ENST00000596152 610 ntTSL 5 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 MIR6761-201ENST00000617899 72 ntBASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 DLST-216ENST00000626051 252 ntTSL 5 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SYCE2Q6PIF2 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AL590004.4-201ENST00000566733 7060 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AF228730.7-203ENST00000641436 1804 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AL139811.2-201ENST00000373465 1630 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AC114786.2-201ENST00000510090 1426 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 MIR595-201ENST00000384905 96 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 SNORA57.2-201ENST00000391265 128 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 RN7SKP251-201ENST00000410830 314 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 RN7SL757P-201ENST00000466709 301 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 RPL7P17-201ENST00000470927 724 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AC114801.1-201ENST00000512633 297 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 RN7SKP14-201ENST00000516000 329 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 RPL35AP25-201ENST00000584631 330 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AC073534.1-201ENST00000598671 1056 ntBASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 BPNT1-201ENST00000322067 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYCE2Q6PIF2 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AL353583.1-201ENST00000624195 1855 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 KCNK2-202ENST00000391895 1410 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms