Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 AC005538.2-201ENST00000623215 1864 ntBASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 ACTBP13-201ENST00000423971 3959 ntBASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.63□□□□□ -1.19
NPIPA3F8WFD2 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AC092718.7-201ENST00000623577 1776 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 RN7SKP239-201ENST00000364814 295 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 MIR146B-201ENST00000365699 73 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 MIR654-201ENST00000385199 81 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 HMGN1P34-201ENST00000413023 290 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 UPF3AP1-201ENST00000413731 1126 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 PIGCP2-201ENST00000433617 835 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 RPS13P2-201ENST00000437890 455 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AC002366.1-201ENST00000446186 1190 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AC069213.3-201ENST00000454858 474 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 KRT18P51-201ENST00000504966 746 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 RNA5SP422-201ENST00000516778 111 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AC079031.2-201ENST00000537742 615 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 PSEN1-223ENST00000557511 1230 ntTSL 5 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AC008870.2-201ENST00000568262 1024 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AL049829.3-202ENST00000604278 711 ntBASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 HHLA2-205ENST00000467562 1457 ntTSL 2 BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPIPA3F8WFD2 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC109826.1-201ENST00000419865 1424 ntTSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC009044.1-201ENST00000624577 1798 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 CSTF3-AS1-201ENST00000500025 2031 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms