Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 POLR2CP1-201ENST00000453699 765 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 RN7SL337P-201ENST00000462468 301 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 RN7SL420P-201ENST00000463843 298 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 TDGF1P3-201ENST00000493351 567 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 LINC01095-203ENST00000512063 1175 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 IGLC5-201ENST00000519670 293 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC022616.2-201ENST00000523185 300 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 OR4A7P-201ENST00000531463 910 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 OR4A19P-201ENST00000533579 1103 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 SLAMF1-204ENST00000538290 1087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 LMO3-222ENST00000540445 906 ntTSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ILF2P2-201ENST00000547482 1117 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 RN7SL804P-201ENST00000582466 298 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC020907.2-202ENST00000592174 728 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 TRMT112P7-201ENST00000603133 367 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 AL122127.1-201ENST00000603832 327 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 GLTP-206ENST00000617457 969 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC119619.1-201ENST00000619728 112 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC011978.1-201ENST00000523386 1406 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 PCLO-209ENST00000618073 1614 ntTSL 5 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC009166.2-201ENST00000624410 2833 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC117382.2-201ENST00000564748 3151 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC011447.6-201ENST00000623510 2598 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 RNA5SP141-201ENST00000364543 120 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 CST9LP1-201ENST00000376987 444 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 MIR185-201ENST00000385288 82 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 U3.17-201ENST00000390863 203 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 SNORA48.6-201ENST00000391156 130 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 MIR1306-201ENST00000408439 85 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 LYG1-202ENST00000409448 1038 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 OR51A8P-201ENST00000421277 940 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC011998.2-201ENST00000430884 473 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC006463.1-201ENST00000445929 232 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 TMEM97P1-201ENST00000452969 451 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 ENPP7P2-201ENST00000462675 943 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 RN7SL800P-201ENST00000484823 280 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNX18Q96RF0 HGNC:18790-205ENST00000504171 980 ntTSL 2 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 RBM48P1-201ENST00000509661 1102 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 GAPDHP35-201ENST00000513369 976 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC020688.1-201ENST00000519282 1248 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 SETP16-201ENST00000531054 711 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC018448.2-201ENST00000548295 305 ntBASIC7.73□□□□□ -1.17
SNX18Q96RF0 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC7.73□□□□□ -1.17
SNX18Q96RF0 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms