Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC126474.1-201ENST00000623555 1293 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 TTC38-207ENST00000629918 162 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
SLC1A1P43005 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.74□□□□□ -1.01
SLC1A1P43005 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 AC007614.2-201ENST00000569877 1851 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 IL15-203ENST00000394159 1545 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 OR8B9P-202ENST00000642028 5216 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 LINC02287-201ENST00000555299 1384 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SLC1A1P43005 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SLC1A1P43005 TUBB4BP7-201ENST00000406999 1234 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 MIR1296-201ENST00000408136 92 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 AP002383.1-201ENST00000439405 720 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 DEFA10P-201ENST00000455014 288 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC8.73□□□□□ -1.01
SLC1A1P43005 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AC087354.1-201ENST00000522373 1037 ntTSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AP001360.1-201ENST00000534055 518 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 SAA3P-202ENST00000534768 642 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC8.73□□□□□ -1.01
SLC1A1P43005 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AC091147.1-201ENST00000583290 510 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AC003991.1-203ENST00000591739 719 ntTSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AC078899.4-201ENST00000593952 1113 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 AC005197.1-201ENST00000597769 683 ntTSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AL645949.1-202ENST00000600073 242 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 AL122127.1-201ENST00000603832 327 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 AC002059.1-201ENST00000608014 477 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SLC1A1P43005 AC016866.3-201ENST00000624037 714 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 FMO9P-202ENST00000488458 1535 ntBASIC8.73□□□□□ -1.01
SLC1A1P43005 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 STXBP6-207ENST00000550887 1311 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 RBMS3-201ENST00000273139 1598 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.73□□□□□ -1.01
SLC1A1P43005 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
SLC1A1P43005 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SLC1A1P43005 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
SLC1A1P43005 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
SLC1A1P43005 AL136146.1-201ENST00000529830 1667 ntBASIC8.72□□□□□ -1.01
SLC1A1P43005 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SLC1A1P43005 WASF4P-201ENST00000444248 1494 ntBASIC8.72□□□□□ -1.01
SLC1A1P43005 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
SLC1A1P43005 RN7SKP194-201ENST00000411328 351 ntBASIC8.72□□□□□ -1.01
SLC1A1P43005 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC8.72□□□□□ -1.01
SLC1A1P43005 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC8.72□□□□□ -1.01
SLC1A1P43005 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.72□□□□□ -1.01
SLC1A1P43005 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.72□□□□□ -1.01
SLC1A1P43005 AL450023.2-201ENST00000453276 545 ntBASIC8.72□□□□□ -1.01
SLC1A1P43005 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
SLC1A1P43005 AC009022.1-201ENST00000472115 496 ntBASIC8.72□□□□□ -1.01
SLC1A1P43005 DNAJC19-205ENST00000479269 610 ntTSL 3 BASIC8.72□□□□□ -1.01
SLC1A1P43005 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC8.72□□□□□ -1.01
SLC1A1P43005 UGT2B29P-201ENST00000509021 973 ntBASIC8.72□□□□□ -1.01
SLC1A1P43005 IGHVII-78-1-201ENST00000521105 269 ntBASIC8.72□□□□□ -1.01
SLC1A1P43005 ASB8-211ENST00000539528 839 ntTSL 3 BASIC8.72□□□□□ -1.01
SLC1A1P43005 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC8.72□□□□□ -1.01
SLC1A1P43005 AC015910.1-202ENST00000580264 633 ntTSL 5 BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms