RNA–Protein interactions for RNA: ENST00000534768.1

SAA3P-202, Transcript of serum amyloid A3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene SAA3P, Length 642 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAA3P-202ENST00000534768 AEBP2Q6ZN18 517 aaPredicted RBP29.31■■■□□ 2.28
SAA3P-202ENST00000534768 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
SAA3P-202ENST00000534768 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
SAA3P-202ENST00000534768 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
SAA3P-202ENST00000534768 FOXD1Q16676 465 aa23.38■■□□□ 1.33
SAA3P-202ENST00000534768 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
SAA3P-202ENST00000534768 MSH5O43196 834 aa22.08■■□□□ 1.13
SAA3P-202ENST00000534768 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
SAA3P-202ENST00000534768 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
SAA3P-202ENST00000534768 ADRA2BP18089 450 aa21.67■■□□□ 1.06
SAA3P-202ENST00000534768 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
SAA3P-202ENST00000534768 NISCHQ9Y2I1 1504 aa20.2■□□□□ 0.82
SAA3P-202ENST00000534768 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
SAA3P-202ENST00000534768 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
SAA3P-202ENST00000534768 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
SAA3P-202ENST00000534768 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
SAA3P-202ENST00000534768 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
SAA3P-202ENST00000534768 HOXD11P31277 338 aaPredicted RBP19.12■□□□□ 0.65
SAA3P-202ENST00000534768 CNKSR2Q8WXI2 1034 aa19.12■□□□□ 0.65
SAA3P-202ENST00000534768 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
SAA3P-202ENST00000534768 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
SAA3P-202ENST00000534768 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
SAA3P-202ENST00000534768 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
SAA3P-202ENST00000534768 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
SAA3P-202ENST00000534768 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
SAA3P-202ENST00000534768 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
SAA3P-202ENST00000534768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
SAA3P-202ENST00000534768 KCNA4P22459 653 aa17.84■□□□□ 0.45
SAA3P-202ENST00000534768 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
SAA3P-202ENST00000534768 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
SAA3P-202ENST00000534768 CAPN15O75808 1086 aa17.63■□□□□ 0.41
SAA3P-202ENST00000534768 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
SAA3P-202ENST00000534768 APLP2Q06481 763 aa17.5■□□□□ 0.39
SAA3P-202ENST00000534768 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
SAA3P-202ENST00000534768 DSG3P32926 999 aa17.49■□□□□ 0.39
SAA3P-202ENST00000534768 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
SAA3P-202ENST00000534768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
SAA3P-202ENST00000534768 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
SAA3P-202ENST00000534768 ZNF219Q9P2Y4 722 aaPredicted RBP17.33■□□□□ 0.36
SAA3P-202ENST00000534768 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
SAA3P-202ENST00000534768 ABCC9O60706 1549 aa17.29■□□□□ 0.36
SAA3P-202ENST00000534768 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
SAA3P-202ENST00000534768 ABCB7O75027 752 aa17.15■□□□□ 0.34
SAA3P-202ENST00000534768 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
SAA3P-202ENST00000534768 POTEHQ6S545 545 aa16.98■□□□□ 0.31
SAA3P-202ENST00000534768 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.29
SAA3P-202ENST00000534768 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
SAA3P-202ENST00000534768 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.28
SAA3P-202ENST00000534768 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
SAA3P-202ENST00000534768 POLA2Q14181 598 aa16.79■□□□□ 0.28
SAA3P-202ENST00000534768 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
SAA3P-202ENST00000534768 NACADO15069 1562 aa16.74■□□□□ 0.27
SAA3P-202ENST00000534768 MYO15BQ96JP2 1530 aa16.74■□□□□ 0.27
SAA3P-202ENST00000534768 DCAF1Q9Y4B6 1507 aa16.73■□□□□ 0.27
SAA3P-202ENST00000534768 RB1CC1Q8TDY2 1594 aa16.7■□□□□ 0.26
SAA3P-202ENST00000534768 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
SAA3P-202ENST00000534768 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
SAA3P-202ENST00000534768 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
SAA3P-202ENST00000534768 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
SAA3P-202ENST00000534768 ZBTB22O15209 634 aa16.34■□□□□ 0.21
SAA3P-202ENST00000534768 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
SAA3P-202ENST00000534768 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
SAA3P-202ENST00000534768 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
SAA3P-202ENST00000534768 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
SAA3P-202ENST00000534768 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
SAA3P-202ENST00000534768 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
SAA3P-202ENST00000534768 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
SAA3P-202ENST00000534768 FBLN2P98095 1184 aa16.07■□□□□ 0.16
SAA3P-202ENST00000534768 SHROOM4Q9ULL8 1493 aa16.06■□□□□ 0.16
SAA3P-202ENST00000534768 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
SAA3P-202ENST00000534768 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
SAA3P-202ENST00000534768 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
SAA3P-202ENST00000534768 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
SAA3P-202ENST00000534768 PIP4P2Q8N4L2 257 aa15.97■□□□□ 0.15
SAA3P-202ENST00000534768 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
SAA3P-202ENST00000534768 SP7Q8TDD2 431 aaPredicted RBP15.87■□□□□ 0.13
SAA3P-202ENST00000534768 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
SAA3P-202ENST00000534768 HAX1O00165 279 aa15.78■□□□□ 0.12
SAA3P-202ENST00000534768 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
SAA3P-202ENST00000534768 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
SAA3P-202ENST00000534768 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
SAA3P-202ENST00000534768 SPDYE1Q8NFV5 336 aaPredicted RBP15.74■□□□□ 0.11
SAA3P-202ENST00000534768 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
SAA3P-202ENST00000534768 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
SAA3P-202ENST00000534768 SSUH2Q9Y2M2 353 aa15.68■□□□□ 0.1
SAA3P-202ENST00000534768 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
SAA3P-202ENST00000534768 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
SAA3P-202ENST00000534768 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
SAA3P-202ENST00000534768 PRKAR2AP13861 404 aaKnown RBP15.58■□□□□ 0.08
SAA3P-202ENST00000534768 MROH2BQ7Z745 1585 aa15.57■□□□□ 0.08
SAA3P-202ENST00000534768 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
SAA3P-202ENST00000534768 ATAD2BQ9ULI0 1458 aa15.5■□□□□ 0.07
SAA3P-202ENST00000534768 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
SAA3P-202ENST00000534768 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
SAA3P-202ENST00000534768 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
SAA3P-202ENST00000534768 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
SAA3P-202ENST00000534768 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
SAA3P-202ENST00000534768 EVX2Q03828 476 aa15.41■□□□□ 0.06
SAA3P-202ENST00000534768 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
SAA3P-202ENST00000534768 WIZO95785 1651 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms