Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 RARRES2P11-201ENST00000635158 484 ntBASIC19.14■□□□□ 0.65
GPC6Q9Y625 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GPC6Q9Y625 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GPC6Q9Y625 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC6Q9Y625 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC6Q9Y625 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC6Q9Y625 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
GPC6Q9Y625 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 KRT19P1-201ENST00000405746 1186 ntBASIC19.13■□□□□ 0.65
GPC6Q9Y625 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 NTF6G-201ENST00000591094 616 ntBASIC19.13■□□□□ 0.65
GPC6Q9Y625 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 KRT16P2-201ENST00000414673 1423 ntBASIC19.13■□□□□ 0.65
GPC6Q9Y625 AC004854.2-201ENST00000608450 1441 ntBASIC19.13■□□□□ 0.65
GPC6Q9Y625 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC6Q9Y625 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GPC6Q9Y625 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 AC104187.1-201ENST00000607510 612 ntBASIC19.12■□□□□ 0.65
GPC6Q9Y625 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.12■□□□□ 0.65
GPC6Q9Y625 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC6Q9Y625 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GPC6Q9Y625 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC6Q9Y625 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC6Q9Y625 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC6Q9Y625 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GPC6Q9Y625 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC6Q9Y625 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.11■□□□□ 0.65
GPC6Q9Y625 AC010141.2-201ENST00000452426 721 ntBASIC19.11■□□□□ 0.65
GPC6Q9Y625 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC6Q9Y625 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC6Q9Y625 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GPC6Q9Y625 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC6Q9Y625 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC6Q9Y625 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC6Q9Y625 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC6Q9Y625 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GPC6Q9Y625 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GPC6Q9Y625 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GPC6Q9Y625 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC6Q9Y625 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
GPC6Q9Y625 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms