Protein–RNA interactions for Protein: Q9Y608

LRRFIP2, Leucine-rich repeat flightless-interacting protein 2, humanhuman

Known RBP Predictions only

Length 721 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP2Q9Y608 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRRFIP2Q9Y608 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
LRRFIP2Q9Y608 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.4■■□□□ 1.66
LRRFIP2Q9Y608 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRRFIP2Q9Y608 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRRFIP2Q9Y608 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LRRFIP2Q9Y608 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRRFIP2Q9Y608 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRFIP2Q9Y608 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRFIP2Q9Y608 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.39■■□□□ 1.66
LRRFIP2Q9Y608 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRFIP2Q9Y608 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRFIP2Q9Y608 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
LRRFIP2Q9Y608 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
LRRFIP2Q9Y608 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRFIP2Q9Y608 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
LRRFIP2Q9Y608 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
LRRFIP2Q9Y608 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
LRRFIP2Q9Y608 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 KRT18P6-201ENST00000555540 1265 ntBASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LRRFIP2Q9Y608 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 AC073314.1-201ENST00000568729 2216 ntBASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRFIP2Q9Y608 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.36■■□□□ 1.65
LRRFIP2Q9Y608 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 ABHD17AP1-201ENST00000358206 933 ntBASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LRRFIP2Q9Y608 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 AL157384.1-201ENST00000445995 2473 ntBASIC25.34■■□□□ 1.65
LRRFIP2Q9Y608 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
LRRFIP2Q9Y608 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
LRRFIP2Q9Y608 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LRRFIP2Q9Y608 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms