Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 MIPEPP3-201ENST00000412105 444 ntBASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB3Q9Y5E6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 AC093787.1-201ENST00000450396 207 ntBASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 RARRES2P4-201ENST00000514074 484 ntBASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 RNA5SP413-201ENST00000516373 109 ntBASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 AC073314.1-201ENST00000568729 2216 ntBASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 RNF165-205ENST00000588679 2904 ntBASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB3Q9Y5E6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB3Q9Y5E6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB3Q9Y5E6 AC245052.3-201ENST00000450182 901 ntBASIC19.83■□□□□ 0.77
PCDHB3Q9Y5E6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHB3Q9Y5E6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB3Q9Y5E6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHB3Q9Y5E6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB3Q9Y5E6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
PCDHB3Q9Y5E6 PLK5-205ENST00000642079 1969 ntBASIC19.83■□□□□ 0.76
PCDHB3Q9Y5E6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDHB3Q9Y5E6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHB3Q9Y5E6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB3Q9Y5E6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 KRT18P29-201ENST00000397031 1267 ntBASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 POU5F1P3-201ENST00000428824 1078 ntBASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 AC092118.2-201ENST00000613495 667 ntBASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB3Q9Y5E6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB3Q9Y5E6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms