Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB9Q9Y5E1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 KRT18P68-201ENST00000392293 1000 ntBASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB9Q9Y5E1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 KRT17P1-201ENST00000399211 1546 ntBASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 FP700111.2-201ENST00000619190 1892 ntBASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 AC087633.2-202ENST00000565166 1439 ntBASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB9Q9Y5E1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 UBE2SP1-201ENST00000450587 669 ntBASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 AP003097.1-201ENST00000530657 1135 ntBASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PCDHB9Q9Y5E1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB9Q9Y5E1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB9Q9Y5E1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB9Q9Y5E1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB9Q9Y5E1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB9Q9Y5E1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB9Q9Y5E1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB9Q9Y5E1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB9Q9Y5E1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms