Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.49■■□□□ 1.35
CTDP1Q9Y5B0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 AC133561.1-201ENST00000568600 2415 ntBASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 AC008550.1-201ENST00000511500 884 ntBASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 AC005829.2-201ENST00000571422 1056 ntBASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 AC233263.1-201ENST00000578059 224 ntBASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CTDP1Q9Y5B0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 EP400NL-214ENST00000641289 2402 ntBASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 MIR718-201ENST00000390190 70 ntBASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CTDP1Q9Y5B0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.46■■□□□ 1.35
CTDP1Q9Y5B0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
CTDP1Q9Y5B0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CTDP1Q9Y5B0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 AC120498.8-201ENST00000614275 531 ntBASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CTDP1Q9Y5B0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms