Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.21■□□□□ 0.67
LHX6Q9UPM6 AC087742.1-201ENST00000575880 1738 ntBASIC19.21■□□□□ 0.67
LHX6Q9UPM6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC19.21■□□□□ 0.67
LHX6Q9UPM6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX6Q9UPM6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX6Q9UPM6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX6Q9UPM6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX6Q9UPM6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 SERPINA7P1-201ENST00000443077 631 ntBASIC19.2■□□□□ 0.66
LHX6Q9UPM6 RBM17P1-201ENST00000453646 1190 ntBASIC19.2■□□□□ 0.66
LHX6Q9UPM6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 NAPSB-206ENST00000562112 1266 ntBASIC19.2■□□□□ 0.66
LHX6Q9UPM6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX6Q9UPM6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 MIR1238-201ENST00000408483 83 ntBASIC19.19■□□□□ 0.66
LHX6Q9UPM6 AL450487.1-201ENST00000426799 995 ntBASIC19.19■□□□□ 0.66
LHX6Q9UPM6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 AP000525.1-201ENST00000608286 694 ntBASIC19.19■□□□□ 0.66
LHX6Q9UPM6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.19■□□□□ 0.66
LHX6Q9UPM6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 CRYGFP-201ENST00000418459 633 ntBASIC19.18■□□□□ 0.66
LHX6Q9UPM6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 AC120498.8-201ENST00000614275 531 ntBASIC19.18■□□□□ 0.66
LHX6Q9UPM6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX6Q9UPM6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 UNC93B2-201ENST00000285383 730 ntBASIC19.17■□□□□ 0.66
LHX6Q9UPM6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 AL031963.3-201ENST00000606441 850 ntBASIC19.17■□□□□ 0.66
LHX6Q9UPM6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX6Q9UPM6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 AC079598.2-202ENST00000546624 1451 ntBASIC19.16■□□□□ 0.66
LHX6Q9UPM6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms