Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH3Q9UM47 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 AC092368.3-202ENST00000574180 1591 ntBASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NOTCH3Q9UM47 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 AC239809.2-201ENST00000415381 517 ntBASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 FAM21FP-204ENST00000608637 956 ntBASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 AC097493.4-201ENST00000641197 219 ntBASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NOTCH3Q9UM47 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NOTCH3Q9UM47 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 RN7SL471P-201ENST00000580476 299 ntBASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 AL445228.2-201ENST00000605589 952 ntBASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms