Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
RIMBP3Q9UFD9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
RIMBP3Q9UFD9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC32.79■■■□□ 2.84
RIMBP3Q9UFD9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
RIMBP3Q9UFD9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
RIMBP3Q9UFD9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RIMBP3Q9UFD9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC32.78■■■□□ 2.84
RIMBP3Q9UFD9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC32.78■■■□□ 2.84
RIMBP3Q9UFD9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RIMBP3Q9UFD9 AC008622.2-201ENST00000617006 1229 ntBASIC32.78■■■□□ 2.84
RIMBP3Q9UFD9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
RIMBP3Q9UFD9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 EED-207ENST00000528180 1745 ntTSL 5 BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RIMBP3Q9UFD9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC32.76■■■□□ 2.84
RIMBP3Q9UFD9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
RIMBP3Q9UFD9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.84
RIMBP3Q9UFD9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC32.76■■■□□ 2.83
RIMBP3Q9UFD9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC32.76■■■□□ 2.83
RIMBP3Q9UFD9 ANKRD20A18P-201ENST00000359341 492 ntBASIC32.76■■■□□ 2.83
RIMBP3Q9UFD9 COX11P1-201ENST00000489116 835 ntBASIC32.76■■■□□ 2.83
RIMBP3Q9UFD9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC32.76■■■□□ 2.83
RIMBP3Q9UFD9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC32.76■■■□□ 2.83
RIMBP3Q9UFD9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC32.76■■■□□ 2.83
RIMBP3Q9UFD9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
RIMBP3Q9UFD9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 AC026271.3-201ENST00000571884 352 ntBASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 AC130371.2-201ENST00000619443 611 ntBASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 AC139530.3-201ENST00000620344 690 ntBASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
RIMBP3Q9UFD9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 CD70-202ENST00000423145 881 ntTSL 2 BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RIMBP3Q9UFD9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 ATP5G2P1-201ENST00000433580 426 ntBASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 AC111152.3-201ENST00000569699 673 ntBASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 PGM5P4-201ENST00000421970 445 ntBASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 AL671883.3-201ENST00000603274 991 ntBASIC32.73■■■□□ 2.83
RIMBP3Q9UFD9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 AL356652.1-201ENST00000615962 565 ntBASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC32.72■■■□□ 2.83
RIMBP3Q9UFD9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 AC004870.1-201ENST00000315132 882 ntBASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC32.71■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms