Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 AC027612.3-201ENST00000413684 1047 ntBASIC19.19■□□□□ 0.66
VAPAQ9P0L0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.19■□□□□ 0.66
VAPAQ9P0L0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 AC142381.2-201ENST00000566120 298 ntBASIC19.18■□□□□ 0.66
VAPAQ9P0L0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 AL139246.5-201ENST00000606645 996 ntBASIC19.18■□□□□ 0.66
VAPAQ9P0L0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
VAPAQ9P0L0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 AP001160.3-201ENST00000601484 763 ntBASIC19.17■□□□□ 0.66
VAPAQ9P0L0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 KRT8P36-201ENST00000489121 1440 ntBASIC19.17■□□□□ 0.66
VAPAQ9P0L0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPAQ9P0L0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 AC091799.1-201ENST00000422823 811 ntBASIC19.16■□□□□ 0.66
VAPAQ9P0L0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 AL691432.2-201ENST00000607222 2038 ntBASIC19.16■□□□□ 0.66
VAPAQ9P0L0 DPP3P2-201ENST00000416030 1696 ntBASIC19.16■□□□□ 0.66
VAPAQ9P0L0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPAQ9P0L0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VAPAQ9P0L0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms