Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.26■□□□□ 0.35
COMMD9Q9P000 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.26■□□□□ 0.35
COMMD9Q9P000 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COMMD9Q9P000 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.26■□□□□ 0.35
COMMD9Q9P000 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
COMMD9Q9P000 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 AC011298.3-201ENST00000615796 283 ntBASIC17.25■□□□□ 0.35
COMMD9Q9P000 AC136469.2-201ENST00000623944 1028 ntBASIC17.25■□□□□ 0.35
COMMD9Q9P000 AC007225.1-201ENST00000566331 1836 ntBASIC17.25■□□□□ 0.35
COMMD9Q9P000 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.25■□□□□ 0.35
COMMD9Q9P000 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD9Q9P000 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
COMMD9Q9P000 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD9Q9P000 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 SERBP1P1-201ENST00000396021 1160 ntBASIC17.23■□□□□ 0.35
COMMD9Q9P000 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 AC121338.2-201ENST00000622535 1744 ntBASIC17.23■□□□□ 0.35
COMMD9Q9P000 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD9Q9P000 AP004607.7-201ENST00000527152 1677 ntBASIC17.23■□□□□ 0.35
COMMD9Q9P000 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.23■□□□□ 0.35
COMMD9Q9P000 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms