Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 TCF3P1-201ENST00000423021 1937 ntBASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
NSMCE4AQ9NXX6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NSMCE4AQ9NXX6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NSMCE4AQ9NXX6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 UBE2DNL-204ENST00000602536 740 ntBASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 MYCNOS-205ENST00000641950 531 ntBASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NSMCE4AQ9NXX6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
NSMCE4AQ9NXX6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NSMCE4AQ9NXX6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
NSMCE4AQ9NXX6 SMG8-203ENST00000578922 2178 ntBASIC20.27■□□□□ 0.83
NSMCE4AQ9NXX6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NSMCE4AQ9NXX6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 AC112907.3-201ENST00000577781 2400 ntBASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.26■□□□□ 0.83
NSMCE4AQ9NXX6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NSMCE4AQ9NXX6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NSMCE4AQ9NXX6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NSMCE4AQ9NXX6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NSMCE4AQ9NXX6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NSMCE4AQ9NXX6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms