Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CUEDC1Q9NWM3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 AL356652.1-201ENST00000615962 565 ntBASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CUEDC1Q9NWM3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 KRT8P36-201ENST00000489121 1440 ntBASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 KRT18P68-201ENST00000392293 1000 ntBASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 BX276092.2-201ENST00000417668 665 ntBASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.61■□□□□ 0.73
CUEDC1Q9NWM3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 AC073314.1-201ENST00000568729 2216 ntBASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CUEDC1Q9NWM3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 MIPEPP3-201ENST00000412105 444 ntBASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 AC105020.6-201ENST00000621523 1217 ntBASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.59■□□□□ 0.73
CUEDC1Q9NWM3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms