Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CISHQ9NSE2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CISHQ9NSE2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CISHQ9NSE2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CISHQ9NSE2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.7■■□□□ 1.06
CISHQ9NSE2 LINC01006-201ENST00000333319 2292 ntBASIC21.7■■□□□ 1.06
CISHQ9NSE2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CISHQ9NSE2 LSM12P1-201ENST00000411836 588 ntBASIC21.7■■□□□ 1.06
CISHQ9NSE2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CISHQ9NSE2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CISHQ9NSE2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CISHQ9NSE2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CISHQ9NSE2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CISHQ9NSE2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CISHQ9NSE2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.7■■□□□ 1.06
CISHQ9NSE2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CISHQ9NSE2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CISHQ9NSE2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.69■■□□□ 1.06
CISHQ9NSE2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CISHQ9NSE2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CISHQ9NSE2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CISHQ9NSE2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.69■■□□□ 1.06
CISHQ9NSE2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CISHQ9NSE2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CISHQ9NSE2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CISHQ9NSE2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.69■■□□□ 1.06
CISHQ9NSE2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CISHQ9NSE2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CISHQ9NSE2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CISHQ9NSE2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.69■■□□□ 1.06
CISHQ9NSE2 GABARAPL3-202ENST00000624044 1851 ntBASIC21.69■■□□□ 1.06
CISHQ9NSE2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CISHQ9NSE2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CISHQ9NSE2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CISHQ9NSE2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.68■■□□□ 1.06
CISHQ9NSE2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.68■■□□□ 1.06
CISHQ9NSE2 HLA-L-209ENST00000420110 1011 ntBASIC21.68■■□□□ 1.06
CISHQ9NSE2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CISHQ9NSE2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CISHQ9NSE2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.68■■□□□ 1.06
CISHQ9NSE2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.68■■□□□ 1.06
CISHQ9NSE2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CISHQ9NSE2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.68■■□□□ 1.06
CISHQ9NSE2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CISHQ9NSE2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CISHQ9NSE2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.67■■□□□ 1.06
CISHQ9NSE2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CISHQ9NSE2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 ID1-201ENST00000376105 1233 ntBASIC21.66■■□□□ 1.06
CISHQ9NSE2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 AL138781.1-201ENST00000566567 1274 ntBASIC21.66■■□□□ 1.06
CISHQ9NSE2 AC092118.2-201ENST00000613495 667 ntBASIC21.66■■□□□ 1.06
CISHQ9NSE2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.66■■□□□ 1.06
CISHQ9NSE2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CISHQ9NSE2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CISHQ9NSE2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CISHQ9NSE2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CISHQ9NSE2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms