Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 DUX4L1-201ENST00000627662 1275 ntBASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 DUX4L8-201ENST00000629013 1275 ntBASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 DUX4L3-201ENST00000630187 1275 ntBASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 DUX4L7-201ENST00000630678 1275 ntBASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 DUX4L5-201ENST00000630834 1275 ntBASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 AP001160.3-201ENST00000601484 763 ntBASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 AC005332.7-201ENST00000614046 2005 ntBASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 RBM17P2-201ENST00000616397 1405 ntBASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SLC52A3Q9NQ40 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 AC027612.3-201ENST00000413684 1047 ntBASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC52A3Q9NQ40 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC52A3Q9NQ40 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 KRT18P20-201ENST00000548986 1279 ntBASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 CCDC92B-201ENST00000575506 885 ntBASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 AL139246.5-201ENST00000606645 996 ntBASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC52A3Q9NQ40 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms