Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 AC243732.1-201ENST00000612648 864 ntBASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA4BQ9NPR2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 SMG8-203ENST00000578922 2178 ntBASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 KRT19P1-201ENST00000405746 1186 ntBASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 SLC7A5P1-201ENST00000568957 537 ntBASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4BQ9NPR2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 AC007322.3-201ENST00000426526 701 ntBASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 UBE2DNL-204ENST00000602536 740 ntBASIC19.83■□□□□ 0.77
SEMA4BQ9NPR2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEMA4BQ9NPR2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEMA4BQ9NPR2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.83■□□□□ 0.76
SEMA4BQ9NPR2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SEMA4BQ9NPR2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SEMA4BQ9NPR2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.83■□□□□ 0.76
SEMA4BQ9NPR2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4BQ9NPR2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4BQ9NPR2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms