Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CD248Q9HCU0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CD248Q9HCU0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.24■□□□□ 0.99
CD248Q9HCU0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.24■□□□□ 0.99
CD248Q9HCU0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.24■□□□□ 0.99
CD248Q9HCU0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CD248Q9HCU0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.24■□□□□ 0.99
CD248Q9HCU0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD248Q9HCU0 POU5F1P3-201ENST00000428824 1078 ntBASIC21.24■□□□□ 0.99
CD248Q9HCU0 AL591742.1-201ENST00000604433 565 ntBASIC21.24■□□□□ 0.99
CD248Q9HCU0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CD248Q9HCU0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD248Q9HCU0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.24■□□□□ 0.99
CD248Q9HCU0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD248Q9HCU0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD248Q9HCU0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD248Q9HCU0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CD248Q9HCU0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD248Q9HCU0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD248Q9HCU0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD248Q9HCU0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD248Q9HCU0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD248Q9HCU0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD248Q9HCU0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD248Q9HCU0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 BX276092.2-201ENST00000417668 665 ntBASIC21.23■□□□□ 0.99
CD248Q9HCU0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 FAM201B-201ENST00000458407 597 ntBASIC21.23■□□□□ 0.99
CD248Q9HCU0 RARRES2P4-201ENST00000514074 484 ntBASIC21.23■□□□□ 0.99
CD248Q9HCU0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD248Q9HCU0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD248Q9HCU0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.23■□□□□ 0.99
CD248Q9HCU0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CD248Q9HCU0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.22■□□□□ 0.99
CD248Q9HCU0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.22■□□□□ 0.99
CD248Q9HCU0 AC010980.2-201ENST00000587099 1412 ntBASIC21.22■□□□□ 0.99
CD248Q9HCU0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
CD248Q9HCU0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.22■□□□□ 0.99
CD248Q9HCU0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.22■□□□□ 0.99
CD248Q9HCU0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CD248Q9HCU0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.22■□□□□ 0.99
CD248Q9HCU0 AC008687.6-201ENST00000596318 630 ntBASIC21.22■□□□□ 0.99
CD248Q9HCU0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
CD248Q9HCU0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD248Q9HCU0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CD248Q9HCU0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.21■□□□□ 0.99
CD248Q9HCU0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.21■□□□□ 0.99
CD248Q9HCU0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 ITM2C-210ENST00000620962 501 ntBASIC21.21■□□□□ 0.99
CD248Q9HCU0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CD248Q9HCU0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD248Q9HCU0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.21■□□□□ 0.99
CD248Q9HCU0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.21■□□□□ 0.99
CD248Q9HCU0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD248Q9HCU0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD248Q9HCU0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 RNA5SP413-201ENST00000516373 109 ntBASIC21.2■□□□□ 0.98
CD248Q9HCU0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD248Q9HCU0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD248Q9HCU0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD248Q9HCU0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.2■□□□□ 0.98
CD248Q9HCU0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms