Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC40Q9H9A6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 DUX4L16-201ENST00000555130 1264 ntBASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 AC011767.1-201ENST00000617410 1153 ntBASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 AC087633.2-202ENST00000565166 1439 ntBASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC40Q9H9A6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 AC016405.3-201ENST00000607710 860 ntBASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC40Q9H9A6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 CNN2P6-201ENST00000439038 900 ntBASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 BID-214ENST00000617586 542 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC40Q9H9A6 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms