Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 AC027702.1-201ENST00000563810 1770 ntBASIC23.73■■□□□ 1.39
SH2D4AQ9H788 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 AC008550.1-201ENST00000511500 884 ntBASIC23.73■■□□□ 1.39
SH2D4AQ9H788 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH2D4AQ9H788 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SH2D4AQ9H788 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 MIR718-201ENST00000390190 70 ntBASIC23.71■■□□□ 1.39
SH2D4AQ9H788 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 AC120498.8-201ENST00000614275 531 ntBASIC23.71■■□□□ 1.39
SH2D4AQ9H788 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.71■■□□□ 1.39
SH2D4AQ9H788 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SH2D4AQ9H788 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SH2D4AQ9H788 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
SH2D4AQ9H788 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SH2D4AQ9H788 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 AC006557.6-201ENST00000623071 864 ntBASIC23.69■■□□□ 1.38
SH2D4AQ9H788 AL049796.1-201ENST00000565336 1766 ntBASIC23.69■■□□□ 1.38
SH2D4AQ9H788 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.69■■□□□ 1.38
SH2D4AQ9H788 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms