Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 AC005829.2-201ENST00000571422 1056 ntBASIC21.12■□□□□ 0.97
RNF38Q9H0F5 AC006557.6-201ENST00000623071 864 ntBASIC21.12■□□□□ 0.97
RNF38Q9H0F5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 AL359736.2-201ENST00000621992 437 ntBASIC21.11■□□□□ 0.97
RNF38Q9H0F5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
RNF38Q9H0F5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 POM121L13P-201ENST00000422362 380 ntBASIC21.1■□□□□ 0.97
RNF38Q9H0F5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 RN7SL471P-201ENST00000580476 299 ntBASIC21.1■□□□□ 0.97
RNF38Q9H0F5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF38Q9H0F5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 RPPH1-201ENST00000516869 333 ntBASIC21.09■□□□□ 0.97
RNF38Q9H0F5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 AC069544.1-201ENST00000609399 999 ntBASIC21.09■□□□□ 0.97
RNF38Q9H0F5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF38Q9H0F5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 C1QBPP2-201ENST00000528754 825 ntBASIC21.08■□□□□ 0.97
RNF38Q9H0F5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RNF38Q9H0F5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RNF38Q9H0F5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF38Q9H0F5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 AC120498.8-201ENST00000614275 531 ntBASIC21.07■□□□□ 0.96
RNF38Q9H0F5 AP006294.2-201ENST00000641667 209 ntBASIC21.07■□□□□ 0.96
RNF38Q9H0F5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms