Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPBQ9H078 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLPBQ9H078 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.38■□□□□ 0.85
CLPBQ9H078 POU5F1P3-201ENST00000428824 1078 ntBASIC20.38■□□□□ 0.85
CLPBQ9H078 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.38■□□□□ 0.85
CLPBQ9H078 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.38■□□□□ 0.85
CLPBQ9H078 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLPBQ9H078 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.38■□□□□ 0.85
CLPBQ9H078 FAM21FP-204ENST00000608637 956 ntBASIC20.38■□□□□ 0.85
CLPBQ9H078 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.38■□□□□ 0.85
CLPBQ9H078 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CLPBQ9H078 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPBQ9H078 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPBQ9H078 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CLPBQ9H078 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLPBQ9H078 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.37■□□□□ 0.85
CLPBQ9H078 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 AL355472.2-201ENST00000422958 438 ntBASIC20.37■□□□□ 0.85
CLPBQ9H078 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.37■□□□□ 0.85
CLPBQ9H078 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.37■□□□□ 0.85
CLPBQ9H078 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.37■□□□□ 0.85
CLPBQ9H078 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.37■□□□□ 0.85
CLPBQ9H078 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.37■□□□□ 0.85
CLPBQ9H078 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.37■□□□□ 0.85
CLPBQ9H078 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.37■□□□□ 0.85
CLPBQ9H078 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.37■□□□□ 0.85
CLPBQ9H078 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.37■□□□□ 0.85
CLPBQ9H078 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLPBQ9H078 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.37■□□□□ 0.85
CLPBQ9H078 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.37■□□□□ 0.85
CLPBQ9H078 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLPBQ9H078 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPBQ9H078 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.36■□□□□ 0.85
CLPBQ9H078 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLPBQ9H078 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.36■□□□□ 0.85
CLPBQ9H078 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
CLPBQ9H078 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.36■□□□□ 0.85
CLPBQ9H078 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLPBQ9H078 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CLPBQ9H078 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.36■□□□□ 0.85
CLPBQ9H078 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.36■□□□□ 0.85
CLPBQ9H078 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLPBQ9H078 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.36■□□□□ 0.85
CLPBQ9H078 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
CLPBQ9H078 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.36■□□□□ 0.85
CLPBQ9H078 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CLPBQ9H078 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CLPBQ9H078 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLPBQ9H078 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLPBQ9H078 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 AC007225.1-201ENST00000566331 1836 ntBASIC20.35■□□□□ 0.85
CLPBQ9H078 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLPBQ9H078 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.35■□□□□ 0.85
CLPBQ9H078 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.35■□□□□ 0.85
CLPBQ9H078 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLPBQ9H078 KRT17P1-201ENST00000399211 1546 ntBASIC20.35■□□□□ 0.85
CLPBQ9H078 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.35■□□□□ 0.85
CLPBQ9H078 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.35■□□□□ 0.85
CLPBQ9H078 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLPBQ9H078 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.35■□□□□ 0.85
CLPBQ9H078 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.35■□□□□ 0.85
CLPBQ9H078 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPBQ9H078 FP700111.2-201ENST00000619190 1892 ntBASIC20.35■□□□□ 0.85
CLPBQ9H078 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPBQ9H078 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPBQ9H078 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLPBQ9H078 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPBQ9H078 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPBQ9H078 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLPBQ9H078 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPBQ9H078 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPBQ9H078 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms