Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 RARRES2P11-201ENST00000635158 484 ntBASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
AMBRA1Q9C0C7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 LINC02228-203ENST00000641970 1355 ntBASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 POU5F1P4-201ENST00000413175 1085 ntBASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 AC008175.2-201ENST00000612840 297 ntBASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.96■□□□□ 0.63
AMBRA1Q9C0C7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 AC092720.2-201ENST00000602388 1665 ntBASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 TERF1P2-201ENST00000583350 1212 ntBASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
AMBRA1Q9C0C7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 AL158211.5-201ENST00000623583 2518 ntBASIC18.94■□□□□ 0.62
AMBRA1Q9C0C7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 AC034268.1-201ENST00000441047 882 ntBASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 CCDC92B-201ENST00000575506 885 ntBASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms