Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 AC061975.6-201ENST00000579045 1553 ntBASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 KRT16P5-201ENST00000455284 522 ntBASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3Q9BZ76 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.39■□□□□ 0.7
CNTNAP3Q9BZ76 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 AC117947.1-201ENST00000427448 529 ntBASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 FAM86EP-206ENST00000510506 987 ntBASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3Q9BZ76 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3Q9BZ76 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3Q9BZ76 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CNTNAP3Q9BZ76 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.38■□□□□ 0.69
CNTNAP3Q9BZ76 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3Q9BZ76 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3Q9BZ76 AC091390.4-202ENST00000476426 537 ntBASIC19.38■□□□□ 0.69
CNTNAP3Q9BZ76 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.38■□□□□ 0.69
CNTNAP3Q9BZ76 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 ECEL1P2-202ENST00000465689 757 ntBASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3Q9BZ76 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 AC005829.2-201ENST00000571422 1056 ntBASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 CR769767.2-201ENST00000622735 460 ntBASIC19.36■□□□□ 0.69
CNTNAP3Q9BZ76 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3Q9BZ76 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms