Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 AC087633.2-202ENST00000565166 1439 ntBASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AC079834.2-201ENST00000609776 1949 ntBASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 UNC93B4-201ENST00000505679 747 ntBASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 C2orf69P4-201ENST00000565394 541 ntBASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AL356652.1-201ENST00000615962 565 ntBASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AC100791.3-201ENST00000617619 330 ntBASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 HLA-B-256ENST00000639848 1089 ntBASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AC121338.2-201ENST00000622535 1744 ntBASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC6.92□□□□□ -1.3
KRTAP4-3Q9BYR4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 OR2A1-AS1-207ENST00000486094 819 ntBASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 RPPH1-201ENST00000516869 333 ntBASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 USP36-216ENST00000589424 970 ntTSL 5 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms