Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 MIR4651-201ENST00000582622 73 ntBASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 AC121338.2-201ENST00000622535 1744 ntBASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SSBP3Q9BWW4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSBP3Q9BWW4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 AC060766.5-201ENST00000590539 871 ntBASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 HLA-B-256ENST00000639848 1089 ntBASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSBP3Q9BWW4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
SSBP3Q9BWW4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.89■□□□□ 0.3
SSBP3Q9BWW4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSBP3Q9BWW4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms