Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 AL138781.1-201ENST00000566567 1274 ntBASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCM2Q9BSQ5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 AC069152.1-201ENST00000438030 544 ntBASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2Q9BSQ5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.96■□□□□ 0.79
CCM2Q9BSQ5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CCM2Q9BSQ5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 AC092720.2-201ENST00000602388 1665 ntBASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms