Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.91■□□□□ 0.46
COL12A1Q99715 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.91■□□□□ 0.46
COL12A1Q99715 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
COL12A1Q99715 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.91■□□□□ 0.46
COL12A1Q99715 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.9■□□□□ 0.46
COL12A1Q99715 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.9■□□□□ 0.46
COL12A1Q99715 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 AC010203.1-204ENST00000548782 407 ntBASIC17.9■□□□□ 0.46
COL12A1Q99715 C9orf163-202ENST00000624034 2573 ntBASIC17.9■□□□□ 0.46
COL12A1Q99715 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.9■□□□□ 0.46
COL12A1Q99715 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
COL12A1Q99715 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.9■□□□□ 0.46
COL12A1Q99715 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.9■□□□□ 0.46
COL12A1Q99715 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.9■□□□□ 0.46
COL12A1Q99715 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.9■□□□□ 0.46
COL12A1Q99715 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 LINC01238-205ENST00000567549 1107 ntBASIC17.9■□□□□ 0.46
COL12A1Q99715 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.9■□□□□ 0.46
COL12A1Q99715 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.9■□□□□ 0.46
COL12A1Q99715 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.9■□□□□ 0.46
COL12A1Q99715 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.9■□□□□ 0.46
COL12A1Q99715 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
COL12A1Q99715 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL12A1Q99715 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL12A1Q99715 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.89■□□□□ 0.46
COL12A1Q99715 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
COL12A1Q99715 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
COL12A1Q99715 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL12A1Q99715 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL12A1Q99715 FDX1P1-201ENST00000449115 551 ntBASIC17.89■□□□□ 0.45
COL12A1Q99715 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.89■□□□□ 0.45
COL12A1Q99715 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL12A1Q99715 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
COL12A1Q99715 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.89■□□□□ 0.45
COL12A1Q99715 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL12A1Q99715 AC010542.4-201ENST00000563151 1910 ntBASIC17.89■□□□□ 0.45
COL12A1Q99715 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL12A1Q99715 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL12A1Q99715 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
COL12A1Q99715 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.89■□□□□ 0.45
COL12A1Q99715 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
COL12A1Q99715 SLC25A1P4-201ENST00000567977 778 ntBASIC17.89■□□□□ 0.45
COL12A1Q99715 AC139887.4-201ENST00000607877 719 ntBASIC17.89■□□□□ 0.45
COL12A1Q99715 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL12A1Q99715 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.88■□□□□ 0.45
COL12A1Q99715 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
COL12A1Q99715 AC245052.3-201ENST00000450182 901 ntBASIC17.88■□□□□ 0.45
COL12A1Q99715 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.88■□□□□ 0.45
COL12A1Q99715 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 AC139530.3-201ENST00000620344 690 ntBASIC17.88■□□□□ 0.45
COL12A1Q99715 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.88■□□□□ 0.45
COL12A1Q99715 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.88■□□□□ 0.45
COL12A1Q99715 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.88■□□□□ 0.45
COL12A1Q99715 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.88■□□□□ 0.45
COL12A1Q99715 AC116562.2-201ENST00000507042 360 ntBASIC17.88■□□□□ 0.45
COL12A1Q99715 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.88■□□□□ 0.45
COL12A1Q99715 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.88■□□□□ 0.45
COL12A1Q99715 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
COL12A1Q99715 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.88■□□□□ 0.45
COL12A1Q99715 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL12A1Q99715 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.88■□□□□ 0.45
COL12A1Q99715 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.87■□□□□ 0.45
COL12A1Q99715 AC116407.4-201ENST00000623319 1061 ntBASIC17.87■□□□□ 0.45
COL12A1Q99715 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL12A1Q99715 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL12A1Q99715 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL12A1Q99715 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
COL12A1Q99715 AL691432.3-201ENST00000621860 400 ntBASIC17.87■□□□□ 0.45
COL12A1Q99715 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.87■□□□□ 0.45
COL12A1Q99715 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COL12A1Q99715 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
COL12A1Q99715 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL12A1Q99715 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL12A1Q99715 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL12A1Q99715 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL12A1Q99715 AC007322.3-201ENST00000426526 701 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms